STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM25639.1Uncharacterized protein. (1153 aa)    
Predicted Functional Partners:
SDM71327.1
Protein of unknown function.
  
    0.922
SDM23776.1
Hypothetical protein.
  
    0.883
SDN19236.1
5-deoxy-glucuronate isomerase.
   
    0.787
SDM75405.1
N-6 DNA Methylase.
  
  
 0.566
SDM83031.1
Type I restriction enzyme M protein.
  
  
 0.566
SDN05056.1
Type I restriction enzyme M protein.
  
  
 0.566
SDN73038.1
Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains.
  
    0.554
SDM26781.1
Hypothetical protein.
 
     0.524
SDN34038.1
Von Willebrand factor type A domain-containing protein.
  
     0.494
SDM37053.1
Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains.
   
    0.491
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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