STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM25678.1Hypothetical protein. (922 aa)    
Predicted Functional Partners:
SDM25657.1
Molecular chaperone HtpG.
 
   
 0.952
SDM81331.1
Right handed beta helix region.
  
 
  0.667
SDN67055.1
AAA+-type ATPase, SpoVK/Ycf46/Vps4 family.
  
 
  0.654
SDM15914.1
ATPase family associated with various cellular activities (AAA).
    
  0.599
SDM80786.1
ATPase family associated with various cellular activities (AAA).
    
  0.599
SDN37087.1
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
    
  0.599
SDN20829.1
LPXTG-motif cell wall anchor domain-containing protein.
  
     0.467
SDN50737.1
L,D-transpeptidase catalytic domain.
  
     0.419
SDM72759.1
Hypothetical protein.
    
   0.412
SDN24948.1
Hypothetical protein.
    
   0.412
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.