STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM26257.1Predicted arabinose efflux permease, MFS family. (412 aa)    
Predicted Functional Partners:
SDM26247.1
DNA-binding transcriptional regulator, MarR family.
 
     0.841
SDM62907.1
Predicted arabinose efflux permease, MFS family.
  
     0.766
SDN67535.1
Predicted arabinose efflux permease, MFS family.
  
     0.747
SDM40782.1
Predicted arabinose efflux permease, MFS family.
  
     0.681
SDM20875.1
Major Facilitator Superfamily protein.
  
     0.652
SDM26279.1
Hyaluronoglucosaminidase.
       0.581
SDM26226.1
Prolyl aminopeptidase Serine peptidase. MEROPS family S33; Belongs to the peptidase S33 family.
       0.559
SDM26299.1
Glyoxylase, beta-lactamase superfamily II.
       0.543
SDM26313.1
Hypothetical protein.
       0.543
SDM26332.1
Transcriptional regulator, LacI family.
       0.543
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.