STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM27462.1Hypothetical protein. (269 aa)    
Predicted Functional Partners:
SDM27480.1
Short-chain dehydrogenase.
       0.773
SDM27493.1
Alpha,alpha-trehalose phosphorylase.
       0.773
SDM27513.1
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/beta-phosphoglucomutase family hydrolase.
       0.773
SDM27431.1
Nucleoside-diphosphate-sugar epimerase.
       0.645
SDM27446.1
Protein of unknown function.
       0.645
SDN07960.1
Adenylyltransferase and sulfurtransferase.
  
  0.624
SDM52959.1
Amino acid adenylation domain-containing protein.
   
 0.454
SDM75651.1
Nucleoside-diphosphate-sugar epimerase.
  
     0.447
SDN11632.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
   
  0.432
SDN61819.1
MarR family protein.
  
     0.407
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.