STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM27819.1Hypothetical protein. (474 aa)    
Predicted Functional Partners:
SDM27789.1
Hypothetical protein.
 
     0.943
SDM27804.1
Hypothetical protein.
       0.794
SDM27765.1
Hypothetical protein.
       0.770
SDM27858.1
Histidine kinase.
 
     0.761
SDM34739.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
   
   0.753
egtB
iron(II)-dependent oxidoreductase; Catalyzes the oxidative sulfurization of hercynine (N- alpha,N-alpha,N-alpha-trimethyl-L-histidine) into hercynyl-gamma-L- glutamyl-L-cysteine sulfoxide, a step in the biosynthesis pathway of ergothioneine; Belongs to the EgtB family.
   
   0.753
SDN04960.1
Subtilase family protein.
  
 
  0.752
SDN55740.1
Beta-lactamase enzyme family protein.
  
     0.751
SDN19957.1
Pectate lyase superfamily protein.
  
     0.747
SDM77089.1
Hypothetical protein.
  
     0.744
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.