STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM27995.1ABC-2 type transport system ATP-binding protein. (316 aa)    
Predicted Functional Partners:
SDM27974.1
ABC-2 type transport system permease protein.
 
 0.958
SDM86886.1
Oleandomycin transport system permease protein.
 
 0.901
SDM74941.1
ABC transporter efflux protein, DrrB family.
 
 0.861
SDM86729.1
Oleandomycin transport system permease protein.
 
  
 0.836
SDN12208.1
ABC-2 type transport system permease protein.
  
 
  0.798
SDM48006.1
ABC-2 type transport system permease protein.
  
 
  0.793
SDN51254.1
ABC-2 type transport system permease protein.
 
  
  0.782
SDN03599.1
ABC-2 type transport system permease protein.
 
  
  0.781
SDM27963.1
Hypothetical protein; Belongs to the cytochrome P450 family.
   
   0.710
SDN52590.1
Lipooligosaccharide transport system permease protein.
  
 
  0.639
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.