STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM28188.1Glyoxalase-like domain-containing protein. (137 aa)    
Predicted Functional Partners:
SDM28210.1
Methyltransferase domain-containing protein.
       0.768
icmF
methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
    
  0.679
SDM97415.1
Hypothetical protein.
  
  
  0.651
SDN23757.1
Hypothetical protein.
  
  
  0.644
SDM92964.1
Hypothetical protein.
  
  
  0.643
SDM95515.1
Ribosomal protein S18 acetylase RimI.
 
 
    0.616
SDN51657.1
DSBA-like thioredoxin domain-containing protein.
 
     0.564
SDM28448.1
Protein of unknown function.
  
     0.555
SDM21413.1
Protein of unknown function.
  
     0.553
SDM64354.1
Protein of unknown function.
  
     0.502
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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