STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM28210.1Methyltransferase domain-containing protein. (264 aa)    
Predicted Functional Partners:
SDM28188.1
Glyoxalase-like domain-containing protein.
       0.768
SDN30028.1
4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family.
   
  0.739
SDN66254.1
Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
   
  0.739
SDM46617.1
Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family.
 
      0.632
SDM93214.1
Protoporphyrin IX magnesium-chelatase.
  
 0.605
SDM28768.1
Acetyltransferase (GNAT) domain-containing protein.
  
 
   0.514
SDM25755.1
Polynucleotide kinase-phosphatase.
    
   0.495
SDM56886.1
Predicted ABC-type ATPase.
    
   0.495
SDM68248.1
Predicted kinase.
    
   0.495
SDN10639.1
Diadenosine tetraphosphatase ApaH/serine/threonine protein phosphatase, PP2A family.
    
   0.495
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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