STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM28504.13-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit. (368 aa)    
Predicted Functional Partners:
SDN07923.1
Nitrite reductase (NADH) small subunit.
 
  0.873
SDM79650.1
Nitrite reductase (NADH) small subunit.
 
  0.871
SDM79733.1
Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.868
SDM18301.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit.
  
  0.851
SDN66197.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit.
  
  0.851
folE
GTP cyclohydrolase I.
       0.776
SDM67050.1
Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase; Manually curated.
 
  0.756
SDN20943.1
NAD(P)H-flavin reductase; Belongs to the globin family.
  
 
 0.721
SDM71346.1
Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase.
  
  0.718
SDM79691.1
MFS transporter, NNP family, nitrate/nitrite transporter.
  
 
 0.705
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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