STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM28683.1Hypothetical protein. (135 aa)    
Predicted Functional Partners:
SDM28700.1
Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.
 
    0.881
SDM28660.1
Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family.
 
     0.843
SDM83282.1
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein.
  
  
  0.719
SDM30662.1
Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.
 
    0.527
SDM14935.1
Protein of unknown function.
 
      0.487
SDM50897.1
Glyoxalase family protein.
    
  0.485
SDN31449.1
Hypothetical protein.
  
    0.416
SDM69458.1
Hypothetical protein.
  
     0.414
SDM80847.1
AAA ATPase domain-containing protein.
  
     0.411
SDM37174.1
4-amino-4-deoxy-L-arabinose transferase.
  
     0.410
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.