STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM28783.1Hypothetical protein. (1269 aa)    
Predicted Functional Partners:
SDM28866.1
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
     0.895
SDM28802.1
MFS transporter, SP family, inositol transporter.
       0.776
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
  0.689
SDM51582.1
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase).
  
     0.640
SDM28634.1
alpha-L-rhamnosidase.
 
     0.584
SDN02229.1
Lysophospholipase L1.
  
  0.576
SDM28819.1
L-rhamnose isomerase / sugar isomerase.
 
     0.549
SDM57992.1
Lysophospholipase L1.
  
  0.545
SDN46339.1
GDSL-like Lipase/Acylhydrolase family protein.
  
  0.538
SDN01144.1
Lysophospholipase L1.
  
  0.533
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.