STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM28840.1Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. (686 aa)    
Predicted Functional Partners:
SDM28896.1
Rhamnulokinase.
 
 0.988
SDM28819.1
L-rhamnose isomerase / sugar isomerase.
 
  
  0.986
SDM80251.1
PfaB family protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.953
SDM52959.1
Amino acid adenylation domain-containing protein.
  
 0.929
SDM28866.1
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
  
  0.891
SDM43093.1
FabA-like domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.831
SDM25165.1
Erythronolide synthase docking.
  
 0.812
SDM25186.1
Acyl transferase domain-containing protein.
  
 0.812
SDM31213.1
Polyketide synthase 12.
  
 0.812
SDM31252.1
Acyl transferase domain-containing protein.
  
 0.812
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.