STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM35331.1Nitroimidazol reductase NimA, pyridoxamine 5'-phosphate oxidase superfamily. (177 aa)    
Predicted Functional Partners:
SDM35315.1
Thiosulfate dehydrogenase [quinone] large subunit.
 
     0.870
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
   
    0.701
SDM19953.1
Proteasome assembly chaperone (PAC2) family protein.
  
    0.505
SDN69750.1
Uncharacterized hydrophobic domain-containing protein.
  
     0.491
SDM42758.1
Nucleotide-binding universal stress protein, UspA family.
 
    0.458
SDM35297.1
Para-nitrobenzyl esterase.
  
    0.451
SDM75348.1
Predicted ATP-dependent carboligase, ATP-grasp superfamily.
   
    0.437
SDM72819.1
Nucleotide-binding universal stress protein, UspA family.
 
    0.426
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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