STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM35435.1Hypothetical protein. (188 aa)    
Predicted Functional Partners:
SDM35992.1
Nitroreductase family protein.
 
  
 0.876
SDM42687.1
Nitroreductase family protein.
  
  
 0.841
SDM20243.1
Zn-dependent protease (includes SpoIVFB); Belongs to the peptidase M50B family.
   
    0.766
SDM56089.1
Hypothetical protein.
   
    0.725
SDM60782.1
1-phosphofructokinase.
   
    0.709
SDM76515.1
Tagatose 6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family.
   
    0.709
SDM35456.1
Hypothetical protein.
       0.631
SDM35421.1
Uncharacterized conserved protein, DUF2267 family.
 
     0.582
SDN06878.1
Protein of unknown function.
  
    0.548
SDM34051.1
Integral membrane sensor domain MASE1.
  
     0.532
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.