Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDM20801.1 | SDM33543.1 | SAMN04489726_0365 | SAMN04489726_1093 | 5'-3' exonuclease. | ATP-dependent DNA ligase LigD phosphoesterase module /ATP-dependent DNA ligase LigD polymerase module. | 0.857 |
SDM20801.1 | SDM38422.1 | SAMN04489726_0365 | SAMN04489726_1356 | 5'-3' exonuclease. | Putative hydrolase. | 0.936 |
SDM20801.1 | SDM44687.1 | SAMN04489726_0365 | SAMN04489726_1669 | 5'-3' exonuclease. | Bifunctional non-homologous end joining protein LigD. | 0.830 |
SDM20801.1 | SDM86436.1 | SAMN04489726_0365 | SAMN04489726_3736 | 5'-3' exonuclease. | ATP-dependent DNA ligase. | 0.897 |
SDM20801.1 | SDN41193.1 | SAMN04489726_0365 | SAMN04489726_6501 | 5'-3' exonuclease. | Exodeoxyribonuclease-3. | 0.899 |
SDM20801.1 | lig | SAMN04489726_0365 | SAMN04489726_4930 | 5'-3' exonuclease. | DNA ligase-1; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair. | 0.853 |
SDM20801.1 | polA | SAMN04489726_0365 | SAMN04489726_3362 | 5'-3' exonuclease. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.721 |
SDM33543.1 | SDM20801.1 | SAMN04489726_1093 | SAMN04489726_0365 | ATP-dependent DNA ligase LigD phosphoesterase module /ATP-dependent DNA ligase LigD polymerase module. | 5'-3' exonuclease. | 0.857 |
SDM33543.1 | SDM38422.1 | SAMN04489726_1093 | SAMN04489726_1356 | ATP-dependent DNA ligase LigD phosphoesterase module /ATP-dependent DNA ligase LigD polymerase module. | Putative hydrolase. | 0.953 |
SDM33543.1 | SDM44687.1 | SAMN04489726_1093 | SAMN04489726_1669 | ATP-dependent DNA ligase LigD phosphoesterase module /ATP-dependent DNA ligase LigD polymerase module. | Bifunctional non-homologous end joining protein LigD. | 0.910 |
SDM33543.1 | SDM59182.1 | SAMN04489726_1093 | SAMN04489726_2406 | ATP-dependent DNA ligase LigD phosphoesterase module /ATP-dependent DNA ligase LigD polymerase module. | D,D-heptose 1,7-bisphosphate phosphatase; Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. | 0.763 |
SDM33543.1 | SDM86436.1 | SAMN04489726_1093 | SAMN04489726_3736 | ATP-dependent DNA ligase LigD phosphoesterase module /ATP-dependent DNA ligase LigD polymerase module. | ATP-dependent DNA ligase. | 0.521 |
SDM33543.1 | SDN41193.1 | SAMN04489726_1093 | SAMN04489726_6501 | ATP-dependent DNA ligase LigD phosphoesterase module /ATP-dependent DNA ligase LigD polymerase module. | Exodeoxyribonuclease-3. | 0.837 |
SDM33543.1 | lig | SAMN04489726_1093 | SAMN04489726_4930 | ATP-dependent DNA ligase LigD phosphoesterase module /ATP-dependent DNA ligase LigD polymerase module. | DNA ligase-1; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair. | 0.810 |
SDM33543.1 | polA | SAMN04489726_1093 | SAMN04489726_3362 | ATP-dependent DNA ligase LigD phosphoesterase module /ATP-dependent DNA ligase LigD polymerase module. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.942 |
SDM38422.1 | SDM20801.1 | SAMN04489726_1356 | SAMN04489726_0365 | Putative hydrolase. | 5'-3' exonuclease. | 0.936 |
SDM38422.1 | SDM33543.1 | SAMN04489726_1356 | SAMN04489726_1093 | Putative hydrolase. | ATP-dependent DNA ligase LigD phosphoesterase module /ATP-dependent DNA ligase LigD polymerase module. | 0.953 |
SDM38422.1 | SDM44687.1 | SAMN04489726_1356 | SAMN04489726_1669 | Putative hydrolase. | Bifunctional non-homologous end joining protein LigD. | 0.897 |
SDM38422.1 | SDM59182.1 | SAMN04489726_1356 | SAMN04489726_2406 | Putative hydrolase. | D,D-heptose 1,7-bisphosphate phosphatase; Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. | 0.945 |
SDM38422.1 | SDM86436.1 | SAMN04489726_1356 | SAMN04489726_3736 | Putative hydrolase. | ATP-dependent DNA ligase. | 0.936 |
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