STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM40313.1GtrA-like protein. (419 aa)    
Predicted Functional Partners:
SDM40338.1
4-amino-4-deoxy-L-arabinose transferase.
 
 0.957
SDM17163.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
  
 
 0.859
SDM24374.1
4-amino-4-deoxy-L-arabinose transferase.
 
 0.845
SDM24322.1
4-amino-4-deoxy-L-arabinose transferase.
 
 0.842
SDM88730.1
4-amino-4-deoxy-L-arabinose transferase.
 
 0.822
SDM40290.1
Two-component system, OmpR family, sensor kinase.
 
 
   0.679
SDN56406.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
  
 0.665
SDN27561.1
Methyltransferase domain-containing protein.
  
 
 0.621
SDM24346.1
GtrA-like protein.
 
 
0.592
SDM29289.1
Glycosyl transferase family 2.
  
 
 0.578
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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