STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM40767.1YjbR protein. (135 aa)    
Predicted Functional Partners:
SDN44279.1
Glycosyltransferase, GT2 family.
  
     0.587
SDM75482.1
Regulatory protein, luxR family.
  
     0.578
SDM40782.1
Predicted arabinose efflux permease, MFS family.
       0.564
SDN63082.1
Hypothetical protein.
  
     0.519
SDN40631.1
Hypothetical protein.
  
     0.496
SDM67964.1
Signal transduction histidine kinase.
  
     0.471
SDN26934.1
Putative copper resistance protein D.
  
     0.448
SDN08606.1
Hypothetical protein.
  
     0.443
SDN60039.1
Peptidase.
  
     0.438
SDM93569.1
D-alanyl-D-alanine carboxypeptidase.
  
     0.421
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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