STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM42837.1Nitroreductase family protein. (256 aa)    
Predicted Functional Partners:
SDM42856.1
Nucleotide-binding universal stress protein, UspA family.
 
     0.823
SDM42815.1
Nucleotide-binding universal stress protein, UspA family.
       0.746
SDM93040.1
uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase.
    
 0.733
SDM42801.1
Xylulose-5-phosphate/fructose-6-phosphate phosphoketolase.
       0.726
SDN16326.1
Uroporphyrinogen III methyltransferase / synthase.
  
 
 0.702
SDM52959.1
Amino acid adenylation domain-containing protein.
  
 
 0.531
SDM45135.1
Catechol 2,3-dioxygenase.
  
    0.514
SDN57800.1
Probable phosphoglycerate mutase.
    
  0.510
SDN07960.1
Adenylyltransferase and sulfurtransferase.
    
  0.504
SDM94794.1
Hypothetical protein.
  
    0.486
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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