STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM43393.1HNH endonuclease. (367 aa)    
Predicted Functional Partners:
SDM81066.1
Protein of unknown function.
  
     0.766
SDM40867.1
Protein of unknown function.
  
     0.765
SDM52853.1
Protein of unknown function.
  
     0.765
SDM54465.1
Protein of unknown function.
  
     0.765
SDM56006.1
Protein of unknown function.
  
     0.765
SDM68339.1
Protein of unknown function.
  
     0.765
SDM29627.1
Protein of unknown function.
  
     0.764
SDM35922.1
Protein of unknown function.
  
     0.764
SDM37030.1
Protein of unknown function.
  
     0.764
SDM37271.1
Protein of unknown function.
  
     0.764
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.