STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM44261.1SnoaL-like domain-containing protein. (117 aa)    
Predicted Functional Partners:
SDM44238.1
Transcriptional regulator, contains XRE-family HTH domain.
 
     0.888
SDM99786.1
(R)-ethylmalonyl-CoA mutase.
    
 0.843
icmF
methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
    
 0.766
SDN15259.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
     
 0.742
SDM74114.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
  
 
 0.738
SDM43619.1
Heterodimeric methylmalonyl-CoA mutase small subunit.
    
 0.723
SDM43638.1
Heterodimeric methylmalonyl-CoA mutase large subunit precursor.
    
 0.723
SDN10813.1
Threonine dehydratase.
   
 
  0.677
SDM44231.1
NADPH2:quinone reductase.
   
  0.539
SDN03352.1
Acyl transferase domain-containing protein.
  
 0.537
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.