STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM45919.1Hypothetical protein. (307 aa)    
Predicted Functional Partners:
SDN57532.1
TIGR02680 family protein.
 
   0.959
SDM82512.1
TIGR02680 family protein.
 
 
 0.949
SDN06970.1
Cell division transport system permease protein; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
   
 
 0.900
SDN67157.1
Signal transduction histidine kinase.
    
 0.884
SDM19883.1
Hypothetical protein.
   
   0.820
SDN07887.1
Tetratricopeptide repeat-containing protein.
   
   0.820
SDN11410.1
Tetratricopeptide repeat-containing protein.
   
   0.820
SDN49187.1
HAMP domain-containing protein.
    
  0.781
SDM45381.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.763
SDM34481.1
PAS domain S-box-containing protein.
    
  0.680
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.