STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM46940.1Transcriptional regulator, TetR family. (203 aa)    
Predicted Functional Partners:
SDM46907.1
Uncharacterized conserved protein, contains Zn finger domain.
       0.773
SDM46917.1
Helicase conserved C-terminal domain-containing protein.
       0.773
SDN46866.1
Regulatory protein, tetR family.
  
     0.702
SDM41723.1
DNA-binding transcriptional regulator, AcrR family; Manually curated.
  
     0.694
SDN47656.1
Regulatory protein, tetR family.
  
     0.687
SDN52079.1
Regulatory protein, tetR family.
  
     0.680
SDM65717.1
Regulatory protein, tetR family.
  
     0.657
SDM60502.1
Regulatory protein, tetR family.
  
     0.639
SDM57241.1
Regulatory protein, tetR family.
  
     0.613
SDM46951.1
2-polyprenyl-6-methoxyphenol hydroxylase.
       0.548
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.