STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM49314.1Cysteine-rich secretory protein family protein. (160 aa)    
Predicted Functional Partners:
SDM78864.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
   
   0.821
SDM49268.1
Component of the Tol biopolymer transport system.
       0.510
SDM49337.1
Cytochrome P450 / NADPH-cytochrome P450 reductase.
       0.506
SDN20943.1
NAD(P)H-flavin reductase; Belongs to the globin family.
    
  0.472
SDM95614.1
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
    
  0.470
SDN29898.1
L-2-hydroxyglutarate oxidase.
    
  0.452
SDN73977.1
Phage tail protein.
  
    0.406
SDM16158.1
Hypothetical protein.
   
    0.404
SDM25741.1
Hypothetical protein.
   
    0.404
SDM28783.1
Hypothetical protein.
   
    0.404
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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