STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM51492.1Platelet-activating factor acetylhydrolase, isoform II. (390 aa)    
Predicted Functional Partners:
SDM51137.1
Necrosis inducing protein (NPP1).
  
     0.564
SDM51480.1
Glycosyltransferase WbsX.
       0.557
SDN49626.1
Acetyltransferase (GNAT) family protein; Non-canonical start codon; manually curated.
  
    0.550
dnaE2
Error-prone DNA polymerase, DnaE-like; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.
       0.547
SDN66318.1
Hypothetical protein.
  
     0.537
SDM69095.1
Protein of unknown function.
  
 
 0.523
SDM87126.1
Lysophospholipase, alpha-beta hydrolase superfamily.
  
     0.498
SDM60540.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.496
SDM28065.1
Tannase and feruloyl esterase.
  
     0.486
SDM44444.1
2-polyprenyl-6-methoxyphenol hydroxylase.
  
     0.466
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.