STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM51582.1Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase). (354 aa)    
Predicted Functional Partners:
SDM52959.1
Amino acid adenylation domain-containing protein.
   
 0.829
SDN44189.1
Coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase.
 
  
 0.661
SDM51779.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
  
  
 0.647
SDM28783.1
Hypothetical protein.
  
     0.640
SDN31190.1
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase).
  
     0.637
SDN39454.1
Pyruvate phosphate dikinase, PEP/pyruvate binding domain.
  
     0.625
SDN29359.1
Luciferase-like monooxygenase.
  
     0.621
SDN44207.1
LPPG:FO 2-phospho-L-lactate transferase.
  
   
 0.609
SDM25373.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
  
  
 0.539
SDN68140.1
F420-dependent oxidoreductase, G6PDH family.
  
     0.526
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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