STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM53540.1Protein of unknown function. (333 aa)    
Predicted Functional Partners:
SDM23316.1
HNH endonuclease.
  
     0.649
SDM29206.1
Protein of unknown function.
  
     0.649
SDM47196.1
Protein of unknown function.
  
     0.647
SDM21914.1
HNH endonuclease.
  
     0.646
SDM24504.1
HNH endonuclease.
  
     0.644
SDM43393.1
HNH endonuclease.
  
     0.642
SDM26488.1
Protein of unknown function.
  
     0.640
SDM25396.1
HNH endonuclease.
  
     0.636
SDM44373.1
Protein of unknown function.
  
     0.470
SDM53527.1
Ubiquinone/menaquinone biosynthesis C-methylase UbiE.
       0.410
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.