STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM56579.1Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. (473 aa)    
Predicted Functional Partners:
SDM56551.1
Ketoacyl-synthetase C-terminal extension; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 0.994
SDM52959.1
Amino acid adenylation domain-containing protein.
 
0.990
SDM52919.1
Beta-ketoacyl synthase, C-terminal domain; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 0.989
SDM29063.1
Acyl transferase domain-containing protein.
 0.987
SDM23185.1
Condensation domain-containing protein.
 0.986
SDM29007.1
Phosphopantetheine attachment site.
 0.985
SDM56512.1
Acyl transferase domain-containing protein.
 0.984
SDM25203.1
Acyl transferase domain-containing protein.
 0.978
SDM58841.1
Acyl transferase domain-containing protein.
 0.972
SDM25082.1
Acyl transferase domain-containing protein.
 0.970
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.