STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM57429.1Methyltransferase domain-containing protein. (344 aa)    
Predicted Functional Partners:
SDM65218.1
Protein of unknown function.
  
     0.702
SDM43996.1
Lipase (class 3).
 
     0.628
SDM57406.1
MbtH protein.
       0.601
SDM91879.1
Phospholipase A2.
  
     0.588
SDM91856.1
Phospholipase A2.
  
     0.569
SDN49722.1
Hypothetical protein.
  
     0.546
SDM27632.1
Pyridoxamine 5'-phosphate oxidase.
  
     0.544
rsmI
16S rRNA (cytidine1402-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
  
  
 0.516
SDN40966.1
Ketosteroid isomerase homolog.
  
     0.473
SDN34730.1
Hypothetical protein.
  
     0.445
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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