STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM58268.1Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. (10259 aa)    
Predicted Functional Partners:
SDM52959.1
Amino acid adenylation domain-containing protein.
 
0.999
SDM80251.1
PfaB family protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.998
SDM31339.1
Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase D.
 
 0.996
SDM77359.1
Polyketide-type polyunsaturated fatty acid synthase PfaA.
  
 0.995
SDM52919.1
Beta-ketoacyl synthase, C-terminal domain; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 0.994
SDM58221.1
MbtH protein.
 
 0.993
SDN03352.1
Acyl transferase domain-containing protein.
 
 0.992
SDM25032.1
Acyl transferase domain-containing protein.
 
 0.991
SDM37095.1
Acyl transferase domain-containing protein.
 
 0.991
SDM49627.1
Acyl transferase domain-containing protein.
 
 0.990
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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