STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM58991.1MFS transporter, FSR family, fosmidomycin resistance protein; Manually curated. (363 aa)    
Predicted Functional Partners:
SDM59005.1
AraC-type DNA-binding protein.
 
     0.890
SDM33358.1
Glyoxalase-like domain-containing protein.
  
     0.637
SDN07623.1
Hypothetical protein.
  
     0.561
SDN47743.1
D-alanyl-D-alanine carboxypeptidase.
  
     0.510
SDM28287.1
D-alanyl-D-alanine carboxypeptidase.
  
     0.485
SDM91410.1
Chitosanase of glycosyl hydrolase group 75.
  
     0.481
SDM85220.1
AraC-type DNA-binding protein.
  
     0.432
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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