STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM63335.1Nitroreductase. (216 aa)    
Predicted Functional Partners:
SDM93040.1
uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase.
    
 0.733
SDN16326.1
Uroporphyrinogen III methyltransferase / synthase.
  
 
 0.702
SDN69363.1
DNA-binding transcriptional regulator, MarR family.
  
    0.642
SDN49411.1
Probable F420-dependent oxidoreductase, MSMEG_2516 family.
  
    0.609
SDM63321.1
Lysophospholipase L1.
       0.548
SDM52959.1
Amino acid adenylation domain-containing protein.
  
 
 0.531
SDM86560.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
  
 
 0.517
SDN57800.1
Probable phosphoglycerate mutase.
    
  0.510
SDN07960.1
Adenylyltransferase and sulfurtransferase.
    
  0.504
cobT
Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
    
 0.503
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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