STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM64059.1DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family. (253 aa)    
Predicted Functional Partners:
SDM76515.1
Tagatose 6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.788
SDM29347.1
DeoR C terminal sensor domain-containing protein; Manually curated.
  
     0.741
SDN62946.1
Acyl-CoA synthetase (NDP forming).
    
   0.738
SDM60782.1
1-phosphofructokinase.
 
  
 0.601
SDM64074.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
       0.570
SDM64096.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
       0.570
SDM64112.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
       0.555
SDM64131.1
2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
       0.555
SDN51739.1
Ribose 5-phosphate isomerase B.
  
 
 0.432
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.