STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM64992.1Uncharacterized conserved protein PhnB, glyoxalase superfamily. (155 aa)    
Predicted Functional Partners:
SDM64972.1
AraC-type DNA-binding protein.
 
    0.670
SDM84696.1
DNA-binding transcriptional regulator, HxlR family.
  
    0.568
SDM68322.1
Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain.
   
    0.528
SDM88506.1
Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain.
   
    0.528
SDN66081.1
Cell envelope-related function transcriptional attenuator common domain-containing protein.
   
    0.505
cobB
NAD-dependent protein deacetylase, SIR2 family; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.
   
    0.485
SDM62995.1
DNA-binding transcriptional regulator, HxlR family.
   
    0.485
SDN34659.1
NAD-dependent protein deacetylase, SIR2 family.
   
    0.485
SDN40948.1
DNA-binding transcriptional regulator, HxlR family.
   
    0.485
SDN03978.1
Glyoxylase, beta-lactamase superfamily II.
   
 
  0.460
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.