STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM70869.1Amino acid ABC transporter substrate-binding protein, PAAT family. (274 aa)    
Predicted Functional Partners:
SDN61230.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 0.997
SDN61209.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
 0.967
SDN61274.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 0.940
SDN23253.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 0.931
SDM99700.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 0.904
SDM75920.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 0.881
SDN23281.1
Amino acid ABC transporter membrane protein, PAAT family.
 
  0.837
SDM99743.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 
  0.835
SDM99720.1
Polar amino acid transport system permease protein.
 
  0.826
SDM75899.1
Amino acid ABC transporter membrane protein, PAAT family.
 
  0.812
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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