STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM70889.1Iron (metal) dependent repressor, DtxR family. (225 aa)    
Predicted Functional Partners:
SDM70909.1
Manganese transport system permease protein.
  
 
 0.881
SDM70933.1
Manganese transport system ATP-binding protein.
  
 
 0.852
metN
D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
   
   0.805
SDM33049.1
Ni,Fe-hydrogenase III small subunit; Manually curated.
    
   0.796
SDM70952.1
Manganese transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
  
 
 0.783
SDN60536.1
Hypothetical protein.
   
    0.750
SDN25541.1
Putative transcriptional regulator; Belongs to the UPF0301 (AlgH) family.
   
    0.744
SDM62995.1
DNA-binding transcriptional regulator, HxlR family.
   
    0.669
SDM84696.1
DNA-binding transcriptional regulator, HxlR family.
   
    0.669
SDN40948.1
DNA-binding transcriptional regulator, HxlR family.
   
    0.669
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.