STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM74164.1Pimeloyl-ACP methyl ester carboxylesterase. (369 aa)    
Predicted Functional Partners:
SDM52959.1
Amino acid adenylation domain-containing protein.
  
 0.830
SDM74184.1
Winged helix DNA-binding domain-containing protein.
       0.773
SDN03352.1
Acyl transferase domain-containing protein.
  
 0.752
SDM29007.1
Phosphopantetheine attachment site.
  
  0.641
SDM74145.1
Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.
 
     0.640
SDM57375.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
    
  0.521
SDM61226.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
    
  0.521
SDM25165.1
Erythronolide synthase docking.
  
  0.506
SDM25186.1
Acyl transferase domain-containing protein.
  
  0.506
SDM31213.1
Polyketide synthase 12.
  
  0.506
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.