STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM74673.1Tetratricopeptide repeat-containing protein. (936 aa)    
Predicted Functional Partners:
SDM74652.1
Glyoxylase, beta-lactamase superfamily II; Manually curated.
       0.773
SDN67157.1
Signal transduction histidine kinase.
   
 0.765
SDM74558.1
Hypothetical protein.
  
     0.756
SDN05036.1
Site-specific DNA recombinase.
  
     0.755
SDM34481.1
PAS domain S-box-containing protein.
   
 0.744
SDN04960.1
Subtilase family protein.
  
     0.707
SDN50027.1
Regulatory protein, luxR family.
  
  
  0.698
SDN63214.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
  
    0.686
SDN61932.1
Hypothetical protein.
  
     0.684
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.668
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.