STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM76293.1Cellobiose ABC transporter membrane protein. (301 aa)    
Predicted Functional Partners:
SDM76309.1
Cellobiose-binding protein.
 
  0.990
SDM76266.1
Cellobiose transport system permease protein.
 0.985
SDN19510.1
Cellobiose transport system substrate-binding protein.
 
  0.957
SDM76361.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.952
SDN08666.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
  0.949
SDN35379.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
  0.944
SDN19474.1
Cellobiose ABC transporter membrane protein.
 0.940
SDN02998.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 0.931
SDM44939.1
Multiple sugar transport system permease protein.
 0.929
SDN63254.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 0.929
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.