STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM77950.1ABC-2 type transport system permease protein. (304 aa)    
Predicted Functional Partners:
SDM77924.1
ABC-2 type transport system ATP-binding protein.
 
  0.980
SDM76213.1
Nitrous oxidase accessory protein NosD, contains tandem CASH domains.
  
 
 0.809
SDN09748.1
Outer membrane lipoprotein-sorting protein.
 
     0.689
SDN09764.1
ABC-2 type transport system ATP-binding protein.
  
  0.655
SDN46052.1
ABC-2 family transporter protein.
  
  0.570
SDN46070.1
ABC-2 type transport system ATP-binding protein.
  
  0.550
SDM77900.1
Heme-degrading monooxygenase HmoA.
       0.510
SDM18220.1
ABC-2 type transport system ATP-binding protein.
   
  0.473
SDM22532.1
ABC-2 type transport system ATP-binding protein.
   
  0.473
SDM27995.1
ABC-2 type transport system ATP-binding protein.
   
  0.473
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.