STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM78613.1DNA-binding transcriptional activator of the SARP family. (946 aa)    
Predicted Functional Partners:
SDN04579.1
Predicted ATPase.
  
    0.649
SDN66081.1
Cell envelope-related function transcriptional attenuator common domain-containing protein.
   
    0.641
SDN61009.1
Phosphoglycolate phosphatase, HAD superfamily.
  
    0.635
SDM26631.1
Non-specific serine/threonine protein kinase.
  
    0.632
SDM34341.1
Predicted ATPase.
  
    0.607
SDM73823.1
Non-specific serine/threonine protein kinase.
  
    0.589
SDM92012.1
Predicted ATPase.
  
    0.576
SDN57218.1
Non-specific serine/threonine protein kinase.
  
    0.561
SDN31212.1
tRNA(Arg) A34 adenosine deaminase TadA.
   
    0.556
SDN57200.1
Non-specific serine/threonine protein kinase.
  
    0.525
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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