STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM78829.1Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family. (308 aa)    
Predicted Functional Partners:
SDM78864.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
SDM78878.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
SDM78813.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.
 
 
0.997
SDM78906.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
 
 0.995
SDM70184.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
 
 0.971
SDM63761.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
  
 
 0.936
SDM79902.1
ABC-2 type transport system ATP-binding protein.
 
   
 
0.857
SDM76724.1
ABC-type branched-chain amino acid transport system, substrate-binding protein.
  
 
 0.749
SDN36015.1
ABC-2 type transport system ATP-binding protein; Manually curated.
 
   
 
0.606
SDN54854.1
ABC-2 type transport system ATP-binding protein.
 
   
 
0.517
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.