STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM79007.1Signal transduction histidine kinase. (859 aa)    
Predicted Functional Partners:
SDN67157.1
Signal transduction histidine kinase.
   
 0.963
SDM79034.1
Predicted regulator of Ras-like GTPase activity, Roadblock/LC7/MglB family.
     0.931
SDM79079.1
Signal recognition particle receptor subunit beta, a GTPase.
 
     0.928
SDM79057.1
Protein of unknown function.
 
     0.924
SDM34481.1
PAS domain S-box-containing protein.
   
 0.910
SDM34462.1
Circadian clock protein KaiC.
    
 
 0.839
SDN53499.1
Predicted regulator of Ras-like GTPase activity, Roadblock/LC7/MglB family.
 
     0.788
SDM16592.1
Hypothetical protein.
     0.787
SDN37653.1
Hypothetical protein.
     0.784
SDN01705.1
Protein of unknown function.
 
     0.782
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.