STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM79309.1Cobaltochelatase CobN subunit. (1200 aa)    
Predicted Functional Partners:
SDM93189.1
cob(I)alamin adenosyltransferase.
  
 0.996
SDM93214.1
Protoporphyrin IX magnesium-chelatase.
 
 0.990
cobB-2
Hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) /cobyrinate a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
 
 
 0.988
SDM79376.1
Precorrin-2 C20-methyltransferase / precorrin-3B C17-methyltransferase.
 
  
 0.958
SDM79405.1
precorrin-6A/cobalt-precorrin-6A reductase.
 
   
 0.952
SDM79472.1
precorrin-6Y C5,15-methyltransferase (decarboxylating).
 
  
 0.950
SDM79355.1
precorrin-8X methylmutase.
 
  
 0.932
SDM99839.1
cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
    
 0.919
cobD
Adenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
 
   
 0.909
SDM93103.1
precorrin-6Y C5,15-methyltransferase (decarboxylating).
 
  
 0.884
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.