STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM79524.1Hypothetical protein. (120 aa)    
Predicted Functional Partners:
SDN45690.1
Predicted methyltransferase.
  
     0.610
SDN58812.1
Hypothetical protein.
  
     0.597
SDN58861.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.569
SDM79462.1
Precorrin-4/cobalt-precorrin-4 C11-methyltransferase; Belongs to the precorrin methyltransferase family.
       0.551
SDM79472.1
precorrin-6Y C5,15-methyltransferase (decarboxylating).
       0.551
SDM79504.1
Kallikrein 6 (neurosin, zyme).
       0.551
SDN05862.1
TadE-like protein.
  
     0.455
SDM53685.1
Protein of unknown function.
  
     0.440
SDN63957.1
Uncharacterised nucleotidyltransferase.
  
     0.440
SDM53644.1
Predicted membrane protein.
  
     0.425
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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