STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM79600.1Sirohydrochlorin ferrochelatase. (228 aa)    
Predicted Functional Partners:
SDM93040.1
uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase.
 
 0.998
SDM79629.1
uroporphyrinogen-III synthase.
 
 
 0.955
SDN16326.1
Uroporphyrinogen III methyltransferase / synthase.
  
 
 0.928
SDM93078.1
Cobalt-precorrin 5A hydrolase / precorrin-3B C17-methyltransferase.
 
  
 0.909
SDM79376.1
Precorrin-2 C20-methyltransferase / precorrin-3B C17-methyltransferase.
    
 0.887
SDM93103.1
precorrin-6Y C5,15-methyltransferase (decarboxylating).
 
  
 0.880
SDM79650.1
Nitrite reductase (NADH) small subunit.
 
    0.871
SDM79677.1
Nitrite reductase (NADH) large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
    0.869
SDM79472.1
precorrin-6Y C5,15-methyltransferase (decarboxylating).
    
 0.850
SDM79691.1
MFS transporter, NNP family, nitrate/nitrite transporter.
 
    0.795
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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