STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM81363.1Protein TonB, links inner and outer membranes. (792 aa)    
Predicted Functional Partners:
SDN45995.1
2-oxoglutarate decarboxylase.
  
 0.985
SDM63090.1
Pyruvate dehydrogenase E1 component beta subunit.
  
 0.923
SDM88819.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.923
SDN22922.1
Pyruvate dehydrogenase E1 component beta subunit.
  
 0.923
SDN51027.1
Pyruvate dehydrogenase E1 component beta subunit; Manually curated.
  
 0.923
SDN57104.1
Pyruvate dehydrogenase E1 component beta subunit.
  
 0.923
SDM31163.1
2,4-dienoyl-CoA reductase (NADPH2).
  
 0.904
SDM43795.1
Dihydrolipoamide dehydrogenase.
  
 0.901
SDM77335.1
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component.
  
 0.901
SDM93805.1
Mycothione reductase.
  
 0.901
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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