STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM82167.1Hydrogenase expression/formation protein HypD. (375 aa)    
Predicted Functional Partners:
SDM82185.1
Hydrogenase maturation protein, carbamoyl dehydratase HypE.
 
 0.999
SDM82145.1
Hydrogenase expression/formation protein HypC.
 
 
 0.998
SDM82067.1
Hydrogenase expression/formation protein HypC.
  
 
 0.993
SDM82224.1
Hydrogenase nickel incorporation protein HypB.
 
  
 0.986
hypA
Hydrogenase-3 nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
  
 0.968
SDM82127.1
Hydrogenase maturation protease.
 
   
 0.960
SDM81917.1
Hydrogenase maturation protein HypF.
 
  
 0.925
SDM81995.1
Hydrogenase large subunit.
 
 
 0.904
SDM82009.1
[NiFe]-hydrogenase I apoprotein, small subunit.
 
  
 0.874
SDM82109.1
Hypothetical protein.
 
   
 0.856
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.