STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM85021.1Hypothetical protein. (612 aa)    
Predicted Functional Partners:
SDM84925.1
Acyl-protein synthetase, LuxE.
    
  0.614
SDM84949.1
Phenylacetate-coenzyme A ligase PaaK, adenylate-forming domain family.
    
  0.614
SDM84968.1
phenylacetate-CoA ligase.
    
  0.614
SDM84902.1
Hypothetical protein.
       0.559
SDM84992.1
Transmembrane secretion effector.
       0.559
SDM75468.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
   
 
  0.515
SDM76619.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
   
 
  0.515
SDN03659.1
Hypothetical protein.
   
   0.514
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.497
SDM88393.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
   
    0.483
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.