STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM85107.1Sphingomyelin phosphodiesterase. (305 aa)    
Predicted Functional Partners:
SDN52378.1
Alpha-1,6-glucosidases, pullulanase-type; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.704
SDM20726.1
Diacylglycerol kinase.
   
 
  0.697
SDM15428.1
Selenocysteine lyase/Cysteine desulfurase.
    
   0.630
SDM18173.1
Selenocysteine lyase/Cysteine desulfurase.
    
   0.630
SDM18338.1
Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
    
   0.630
SDM89611.1
Selenocysteine lyase/Cysteine desulfurase.
    
   0.630
SDM90427.1
Selenocysteine lyase/Cysteine desulfurase.
    
   0.630
SDM92791.1
Selenocysteine lyase/Cysteine desulfurase.
    
   0.630
SDN30892.1
Cysteine desulfurase.
    
   0.630
SDM85134.1
GntR family transcriptional regulator / MocR family aminotransferase.
       0.572
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.