STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM86650.1Taurine dioxygenase, alpha-ketoglutarate-dependent. (352 aa)    
Predicted Functional Partners:
SDM86671.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.956
SDM86835.1
Amino acid adenylation domain-containing protein.
  
 0.896
SDM23185.1
Condensation domain-containing protein.
  
 0.854
SDN69257.1
Amino acid adenylation domain-containing protein.
  
 0.853
SDM34587.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
  
 0.850
SDM64876.1
Amino acid adenylation domain-containing protein.
  
 0.843
SDM53095.1
Amino acid adenylation domain-containing protein.
 
  
 0.841
SDM86627.1
Ornithine cyclodeaminase.
 
    0.828
SDM52959.1
Amino acid adenylation domain-containing protein.
 
 0.823
SDM56579.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
 
    0.809
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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